py4cytoscape.style_values.get_node_height

get_node_height(node_names=None, network=None, base_url='http://127.0.0.1:1234/v1')[source]

Retrieve the actual height of specified nodes.

Parameters

  • node_names (list) – List of node names or node SUIDs. Default is None for all nodes.

  • network (SUID or str or None) – Name or SUID of a network. Default is the “current” network active in Cytoscape.

  • base_url (str) – Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://127.0.0.1:1234 and the latest version of the CyREST API supported by this version of py4cytoscape.

Returns

as a collection of {node-name: height} for each node in node_names parameter

Return type

dict

Raises

  • CyError – if network name or node doesn’t exist

  • requests.exceptions.RequestException – if can’t connect to Cytoscape or Cytoscape returns an error

Examples

>>> get_node_height()
{'YOR215C': 50.0, 'YBL026W': 50.0, 'YOL149W': 50.0, ...}
>>> get_node_height(['YOR215C', 'YBL026W', 'YOL149W'])
{'YOR215C': 50.0, 'YBL026W': 50.0, 'YOL149W': 50.0}
>>> get_node_height([395406, 395407, 395404])
{395406: 50.0, 395407: 50.0, 395404: 50.0}
>>> get_node_height(node_names='YOR215C', network='galFiltered.sif')
{'YYOR215C': 46.470588235294116}