Tools

Functions related to TOOLS found in the Tools Menu in Cytoscape.

Browser Control

cybrowser_close([id, base_url])	Cybrowser Close.
cybrowser_dialog([id, text, title, url, …])	Launch Cytoscape’s internal web browser in a separate window
cybrowser_hide([id, base_url])	Cybrowser Hide.
cybrowser_list([base_url])	Cybrowser List.
cybrowser_send([id, script, base_url])	Cybrowser Send.
cybrowser_show([id, text, title, url, base_url])	Cybrowser Show.
cybrowser_version([base_url])	Display the version of the CyBrowser app.

Diffusion

diffusion_advanced([heat_column_name, time, …])	Diffusion Advanced.
diffusion_basic([base_url])	Diffusion Basic.

Misc

analyze_network([directed, base_url])	Calculate various network statistics.
import_file_from_url(source_url, dest_file)	Transfer a cloud-based file to the current Cytoscape directory.
merge_networks([sources, title, operation, …])	Merge Networks.