py4cytoscape.commands.command_run_file
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command_run_file
(file, args=None, base_url='http://127.0.0.1:1234/v1')[source] Command Run File.
The run command will execute a command script from the file pointed to by the file argument, which should contain Cytoscape commands, one per line. Arguments to the script are provided by the args argument
- Parameters
base_url (str) – Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://127.0.0.1:1234 and the latest version of the CyREST API supported by this version of py4cytoscape.
- Returns
{}
- Return type
dict
- Raises
requests.exceptions.RequestException – if can’t connect to Cytoscape or Cytoscape returns an error
Examples
>>> command_run_file('data/CommandScript.txt') {}