py4cytoscape.network_selection.select_all_nodes

select_all_nodes(network=None, base_url='http://127.0.0.1:1234/v1')[source]

Selects all nodes in a Cytoscape Network.

Parameters

  • network (SUID or str or None) – Name or SUID of a network or view. Default is the “current” network active in Cytoscape.

  • base_url (str) – Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://127.0.0.1:1234 and the latest version of the CyREST API supported by this version of py4cytoscape.

Returns

list of SUIDs selected

Return type

list

Raises

  • CyError – if network name or SUID doesn’t exist

  • requests.exceptions.RequestException – if can’t connect to Cytoscape or Cytoscape returns an error

Examples

>>> select_all_nodes()
[107504, 107503, ...]
>>> select_all_nodes('My Network')
[107504, 107503, ...]
>>> select_all_nodes(52)
[107504, 107503, ...]

See also

select_nodes()