py4cytoscape.style_bypasses.clear_node_opacity_bypass

clear_node_opacity_bypass(node_names, network=None, base_url='http://127.0.0.1:1234/v1')[source]

Clear Node Opacity Bypass.

Clear the bypass value for node fill, label and border opacity for the specified node or nodes, effectively restoring any previously defined style defaults or mappings.

Parameters
  • node_names (str or list or int or None) – List of nodes as list of node names or SUIDs, comma-separated string of node names or SUIDs, or scalar node name or SUID. Node names should be found in the name column of the nodes table.

  • network (SUID or str or None) – Name or SUID of a network. Default is the “current” network active in Cytoscape.

  • base_url (str) – Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of py4cytoscape.

Returns

{‘data’: {}, ‘errors’: []}

Return type

dict

Raises
  • CyError – if node or network name doesn’t exist

  • requests.exceptions.RequestException – if can’t connect to Cytoscape or Cytoscape returns an error

Examples

>>> clear_node_opacity_bypass(get_node_names())
''
>>> clear_node_opacity_bypass(['YDL194W', 'YBR043C'], network='galFiltered.sif')
''
>>> clear_node_opacity_bypass('YDL194W, YBR043C', network='galFiltered.sif')
''
>>> clear_node_opacity_bypass([1255, 1988], network='galFiltered.sif')
''
>>> clear_node_opacity_bypass('1255, 1988', network='galFiltered.sif')
''
>>> clear_node_opacity_bypass(1255)
''

Note

To identify a node whose name contains a comma, use ‘\’ to escape the comma. For example, ‘node1, node\,2’ identifies ‘node1’ and ‘node,2’.